1-((2R,4R,5R)-4-Hydroxy-5-hydroxymethyl-tetrahydro-furan-2-yl)-5-methyl-3-prop-2-ynyl-1H-pyrimidine-2,4-dione

ID: ALA524872

Chembl Id: CHEMBL524872

PubChem CID: 11323459

Max Phase: Preclinical

Molecular Formula: C13H16N2O5

Molecular Weight: 280.28

Molecule Type: Small molecule

Associated Items:

Names and Identifiers

Canonical SMILES:  C#CCn1c(=O)c(C)cn([C@H]2C[C@H](O)[C@@H](CO)O2)c1=O

Standard InChI:  InChI=1S/C13H16N2O5/c1-3-4-14-12(18)8(2)6-15(13(14)19)11-5-9(17)10(7-16)20-11/h1,6,9-11,16-17H,4-5,7H2,2H3/t9-,10+,11+/m0/s1

Standard InChI Key:  LZHTUGCZNRVCGE-HBNTYKKESA-N

Associated Targets(Human)

TK1 Tchem Thymidine kinase, cytosolic (627 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

L929 (3802 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Tk1 Thymidine kinase (94 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 280.28Molecular Weight (Monoisotopic): 280.1059AlogP: -1.41#Rotatable Bonds: 3
Polar Surface Area: 93.69Molecular Species: NEUTRALHBA: 7HBD: 2
#RO5 Violations: HBA (Lipinski): 7HBD (Lipinski): 2#RO5 Violations (Lipinski):
CX Acidic pKa: 13.89CX Basic pKa: CX LogP: -0.67CX LogD: -0.67
Aromatic Rings: 1Heavy Atoms: 20QED Weighted: 0.66Np Likeness Score: 0.40

References

1. Byun Y, Yan J, Al-Madhoun AS, Johnsamuel J, Yang W, Barth RF, Eriksson S, Tjarks W..  (2005)  Synthesis and biological evaluation of neutral and zwitterionic 3-carboranyl thymidine analogues for boron neutron capture therapy.,  48  (4): [PMID:15715485] [10.1021/jm0491896]
2. Desbouis D, Struthers H, Spiwok V, Küster T, Schibli R..  (2008)  Synthesis, in vitro, and in silico evaluation of organometallic technetium and rhenium thymidine complexes with retained substrate activity toward human thymidine kinase type 1.,  51  (21): [PMID:18837546] [10.1021/jm800530p]

Source