(R)-4-((3-benzyl-2,5-dioxopiperazin-1-yl)methyl)-N-hydroxybenzamide

ID: ALA5273674

Chembl Id: CHEMBL5273674

Max Phase: Preclinical

Molecular Formula: C19H19N3O4

Molecular Weight: 353.38

Associated Items:

Names and Identifiers

Canonical SMILES:  O=C1CN(Cc2ccc(C(=O)NO)cc2)C(=O)[C@@H](Cc2ccccc2)N1

Standard InChI:  InChI=1S/C19H19N3O4/c23-17-12-22(11-14-6-8-15(9-7-14)18(24)21-26)19(25)16(20-17)10-13-4-2-1-3-5-13/h1-9,16,26H,10-12H2,(H,20,23)(H,21,24)/t16-/m1/s1

Standard InChI Key:  YLHXBAYJVIMROT-MRXNPFEDSA-N

Alternative Forms

  1. Parent:

    ALA5273674

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Associated Targets(Human)

HDAC1 Tclin Histone deacetylase 1 (10854 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC6 Tclin Histone deacetylase 6 (20808 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC8 Tclin Histone deacetylase 8 (4516 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
RPMI-8226 (44974 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
U-266 (527 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Topical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 353.38Molecular Weight (Monoisotopic): 353.1376AlogP: 0.88#Rotatable Bonds: 5
Polar Surface Area: 98.74Molecular Species: NEUTRALHBA: 4HBD: 3
#RO5 Violations: 0HBA (Lipinski): 7HBD (Lipinski): 3#RO5 Violations (Lipinski): 0
CX Acidic pKa: 9.04CX Basic pKa: CX LogP: 0.81CX LogD: 0.80
Aromatic Rings: 2Heavy Atoms: 26QED Weighted: 0.55Np Likeness Score: -0.23

References

1. Chen X, Chen X, Steimbach RR, Wu T, Li H, Dan W, Shi P, Cao C, Li D, Miller AK, Qiu Z, Gao J, Zhu Y..  (2020)  Novel 2, 5-diketopiperazine derivatives as potent selective histone deacetylase 6 inhibitors: Rational design, synthesis and antiproliferative activity.,  187  [PMID:31865013] [10.1016/j.ejmech.2019.111950]

Source