ID: ALA5278294

Max Phase: Preclinical

Molecular Formula: C22H25F3N8O7

Molecular Weight: 570.49

Associated Items:

Representations

Canonical SMILES:  Nc1ncnc2c1ncn2[C@@H]1O[C@H](CN(CC[C@H](N)C(=O)O)Cc2ccc([N+](=O)[O-])c(C(F)(F)F)c2)[C@@H](O)[C@H]1O

Standard InChI:  InChI=1S/C22H25F3N8O7/c23-22(24,25)11-5-10(1-2-13(11)33(38)39)6-31(4-3-12(26)21(36)37)7-14-16(34)17(35)20(40-14)32-9-30-15-18(27)28-8-29-19(15)32/h1-2,5,8-9,12,14,16-17,20,34-35H,3-4,6-7,26H2,(H,36,37)(H2,27,28,29)/t12-,14+,16+,17+,20+/m0/s1

Standard InChI Key:  JPECMMZHGMEUBF-SQIXAUHQSA-N

Associated Targets(Human)

TRDMT1 Tbio tRNA (cytosine(38)-C(5))-methyltransferase (277 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
NSUN2 Tbio RNA cytosine C(5)-methyltransferase NSUN2 (11 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
NSUN6 Tbio tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 (10 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Topical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Properties

Molecular Weight: 570.49Molecular Weight (Monoisotopic): 570.1798AlogP: 0.26#Rotatable Bonds: 10
Polar Surface Area: 229.01Molecular Species: ZWITTERIONHBA: 13HBD: 5
#RO5 Violations: 2HBA (Lipinski): 15HBD (Lipinski): 7#RO5 Violations (Lipinski): 3
CX Acidic pKa: 2.46CX Basic pKa: 9.19CX LogP: -2.17CX LogD: -2.17
Aromatic Rings: 3Heavy Atoms: 40QED Weighted: 0.16Np Likeness Score: -0.16

References

1. Schwickert M, Zimmermann RA, Habeck T, Hoba SN, Nidoieva Z, Fischer TR, Stark MM, Kersten C, Lermyte F, Helm M, Schirmeister T..  (2023)  Covalent S-Adenosylhomocysteine-Based DNA Methyltransferase 2 Inhibitors with a New Type of Aryl Warhead.,  14  (6): [PMID:37312859] [10.1021/acsmedchemlett.3c00062]

Source