N1-(3-(4-chloro-5-methyl-6-(tetrahydro-2H-pyran-4-ylamino)pyrimidin-2-yl)benzyl)-N2-methylethane-1,2-diamine

ID: ALA5279188

Max Phase: Preclinical

Molecular Formula: C20H28ClN5O

Molecular Weight: 389.93

Names and Identifiers

Canonical SMILES:  CNCCNCc1cccc(-c2nc(Cl)c(C)c(NC3CCOCC3)n2)c1

Standard InChI:  InChI=1S/C20H28ClN5O/c1-14-18(21)25-20(26-19(14)24-17-6-10-27-11-7-17)16-5-3-4-15(12-16)13-23-9-8-22-2/h3-5,12,17,22-23H,6-11,13H2,1-2H3,(H,24,25,26)

Standard InChI Key:  PLHVQDJBIKCNOS-UHFFFAOYSA-N

Molfile:  

 
     RDKit          2D

 27 29  0  0  0  0  0  0  0  0999 V2000
   34.8530  -28.1518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.8519  -28.9713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.5599  -29.3803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.2696  -28.9709    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.2668  -28.1482    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.5581  -27.7429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.1452  -27.7434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   33.4376  -28.1521    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   36.9729  -27.7369    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.6794  -28.1459    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   38.3851  -27.7353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   38.3825  -26.9172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.6683  -26.5115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.9655  -26.9244    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   39.0881  -26.5050    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   37.6623  -25.6943    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   36.9516  -25.2909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.9482  -24.4719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.2416  -24.0685    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.5345  -24.4788    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   35.5385  -25.2970    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   36.2496  -25.7048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   39.0917  -28.1394    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   32.7298  -27.7437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   32.0222  -28.1525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.3144  -27.7440    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   30.6068  -28.1528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  1  1  0
  1  7  1  0
  7  8  1  0
  5  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14  9  1  0
 12 15  1  0
 13 16  1  0
 16 17  1  0
 17 18  1  0
 17 22  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 11 23  1  0
  8 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
M  END

Alternative Forms

1. Parent:

   

   ALA5279188

   ---

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type:

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 389.93

Molecular Weight (Monoisotopic): 389.1982

AlogP: 3.01

#Rotatable Bonds: 8

Polar Surface Area: 71.10

Molecular Species: BASE

HBA: 6

HBD: 3

#RO5 Violations: ┄

HBA (Lipinski): 6

HBD (Lipinski): 3

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: ┄

CX Basic pKa: 9.60

CX LogP: 2.97

CX LogD: 0.77

Aromatic Rings: 2

Heavy Atoms: 27

QED Weighted: 0.48

Np Likeness Score: -0.82

References

1. Zhang Z, Guo Z, Xu X, Cao D, Yang H, Li Y, Shi Q, Du Z, Guo X, Wang X, Chen D, Zhang Y, Chen L, Zhou K, Li J, Geng M, Huang X, Xiong B..  (2021)  Structure-Based Discovery of Potent CARM1 Inhibitors for Solid Tumor and Cancer Immunology Therapy.,  64  (22.0): [PMID:34781683] [10.1021/acs.jmedchem.1c01308]

Source

Source(1):

• Scientific Literature