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Capuramycin ID: ALA5280253
Max Phase: Preclinical
Molecular Formula: C23H31N5O12
Molecular Weight: 569.52
Associated Items:
Names and Identifiers Canonical SMILES: CO[C@H]1[C@@H](O)[C@H](n2ccc(=O)[nH]c2=O)O[C@@H]1[C@@H](O[C@@H]1OC(C(=O)N[C@H]2CCCCNC2=O)=C[C@@H](O)[C@H]1O)C(N)=O
Standard InChI: InChI=1S/C23H31N5O12/c1-37-15-14(32)21(28-7-5-12(30)27-23(28)36)39-16(15)17(18(24)33)40-22-13(31)10(29)8-11(38-22)20(35)26-9-4-2-3-6-25-19(9)34/h5,7-10,13-17,21-22,29,31-32H,2-4,6H2,1H3,(H2,24,33)(H,25,34)(H,26,35)(H,27,30,36)/t9-,10+,13+,14+,15-,16-,17+,21+,22-/m0/s1
Standard InChI Key: BISOEENGZHMDEO-YMYWOGEWSA-N
Molfile:
RDKit 2D
41 44 0 0 0 0 0 0 0 0999 V2000
1.9759 -2.5307 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4345 -1.9082 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.6781 -1.1503 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.1909 -0.5007 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3789 -0.5007 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0270 0.2029 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3789 0.9067 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
-0.8390 0.2029 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.0270 -1.2044 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.8390 -1.2044 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.2451 -0.5007 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.0571 -0.5007 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.4631 0.2029 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.0571 0.9067 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.2751 0.2029 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
-3.6811 0.9067 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2480 1.6104 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.4360 1.6104 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-3.5457 2.3683 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
-4.3307 2.6119 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.0073 2.1517 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.0615 1.3397 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.4660 0.7984 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.4631 -1.2044 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.0571 -1.9082 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.4631 -2.6119 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.2451 -1.9082 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.8390 -2.6119 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.6781 0.1759 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.4631 -0.0676 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.1127 0.3924 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
3.0044 1.2044 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6540 1.6916 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.4119 1.3668 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0615 1.8540 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.4931 0.5548 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
3.8435 0.0676 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.9247 -0.7172 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
2.4631 -0.8796 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.1127 -1.3668 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.7849 -1.2039 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0
2 1 1 0
3 2 1 6
4 3 1 0
4 5 1 0
5 6 1 1
6 7 1 0
6 8 2 0
5 9 1 0
10 9 1 1
10 11 1 0
11 12 1 0
12 13 1 0
13 14 2 0
13 15 1 0
16 15 1 1
16 17 1 0
17 18 2 0
17 19 1 0
20 19 1 0
21 20 1 0
22 21 1 0
23 22 1 0
23 16 1 0
12 24 2 0
24 25 1 0
25 26 1 6
25 27 1 0
27 10 1 0
27 28 1 6
29 4 1 0
29 30 1 0
30 31 1 1
32 31 1 0
33 32 2 0
34 33 1 0
34 35 2 0
36 34 1 0
37 36 1 0
31 37 1 0
37 38 2 0
30 39 1 0
39 3 1 0
39 40 1 6
4 41 1 6
M END Associated Targets(non-human) Molecule Features Natural Product: YesOral: NoChemical Probe: NoParenteral: NoMolecule Type: Topical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 569.52Molecular Weight (Monoisotopic): 569.1969AlogP: -4.57#Rotatable Bonds: 8Polar Surface Area: 253.76Molecular Species: NEUTRALHBA: 13HBD: 7#RO5 Violations: 3HBA (Lipinski): 17HBD (Lipinski): 8#RO5 Violations (Lipinski): 3CX Acidic pKa: 9.70CX Basic pKa: ┄CX LogP: -4.23CX LogD: -4.23Aromatic Rings: 1Heavy Atoms: 40QED Weighted: 0.16Np Likeness Score: 0.83
References 1. Serpi M, Ferrari V, Pertusati F.. (2016) Nucleoside Derived Antibiotics to Fight Microbial Drug Resistance: New Utilities for an Established Class of Drugs?, 59 (23): [PMID:27607900 ] [10.1021/acs.jmedchem.6b00325 ]