Citrate monobenzyl ester disodium

ID: ALA5290157

Chembl Id: CHEMBL5290157

Max Phase: Preclinical

Molecular Formula: C13H12Na2O7

Molecular Weight: 282.25

Associated Items:

Names and Identifiers

Canonical SMILES:  O=C([O-])CC(O)(CC(=O)OCc1ccccc1)C(=O)[O-].[Na+].[Na+]

Standard InChI:  InChI=1S/C13H14O7.2Na/c14-10(15)6-13(19,12(17)18)7-11(16)20-8-9-4-2-1-3-5-9;;/h1-5,19H,6-8H2,(H,14,15)(H,17,18);;/q;2*+1/p-2

Standard InChI Key:  POPQCIKYWIPBLS-UHFFFAOYSA-L

Associated Targets(non-human)

Metallo-beta-lactamase type 2 (11 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Topical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 282.25Molecular Weight (Monoisotopic): 282.0740AlogP: 0.41#Rotatable Bonds: 7
Polar Surface Area: 121.13Molecular Species: ACIDHBA: 5HBD: 3
#RO5 Violations: HBA (Lipinski): 7HBD (Lipinski): 3#RO5 Violations (Lipinski):
CX Acidic pKa: 3.39CX Basic pKa: CX LogP: 0.55CX LogD: -5.09
Aromatic Rings: 1Heavy Atoms: 20QED Weighted: 0.62Np Likeness Score: 0.75

References

1. Yamaguchi Y, Kato K, Ichimaru Y, Jin W, Sakai M, Abe M, Wachino JI, Arakawa Y, Miyagi Y, Imai M, Fukuishi N, Yamagata Y, Otsuka M, Fujita M, Kurosaki H..  (2021)  Crystal Structures of Metallo-β-Lactamase (IMP-1) and Its D120E Mutant in Complexes with Citrate and the Inhibitory Effect of the Benzyl Group in Citrate Monobenzyl Ester.,  64  (14.0): [PMID:34242022] [10.1021/acs.jmedchem.1c00308]

Source