1-hydroxypropane-1,2,3-tricarboxylate

ID: ALA539669

Chembl Id: CHEMBL539669

Cas Number: 320-77-4

PubChem CID: 1198

Max Phase: Preclinical

Molecular Formula: C6H8O7

Molecular Weight: 192.12

Molecule Type: Small molecule

Associated Items:

Names and Identifiers

Synonyms: Isocitrate | isocitric acid|isocitrate|320-77-4|1-Hydroxypropane-1,2,3-tricarboxylic acid|I-CIT|3-Carboxy-2,3-dideoxy-1-hydroxypropan-1,2,3-tricarboxylic acid|3-carboxy-2,3-dideoxypentaric acid|DL-Isocitric acid|1-Hydroxytricarballylic acid|9RW6G5D4MQ|1-Hydroxy-1,2,3-propanetricarboxylic acid|CHEBI:30887|D-isocitrate|pentaric acid, 3-carboxy-2,3-dideoxy-|EINECS 206-282-3|1-hydroxytricarballylate|Isocitric acid (8CI)|threo-d(s)-iso-citrate|UNII-9RW6G5D4MQ|SCHEMBL8373|CHEMBL539669|BDBM92496|DTXSIDShow More

Canonical SMILES:  O=C(O)CC(C(=O)O)C(O)C(=O)O

Standard InChI:  InChI=1S/C6H8O7/c7-3(8)1-2(5(10)11)4(9)6(12)13/h2,4,9H,1H2,(H,7,8)(H,10,11)(H,12,13)

Standard InChI Key:  ODBLHEXUDAPZAU-UHFFFAOYSA-N

Alternative Forms

  1. Parent:

    ALA539669

    ISOCITRATE

Associated Targets(Human)

EGLN1 Tclin Egl nine homolog 1 (1702 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

penP Beta-lactamase (38 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: YesOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 192.12Molecular Weight (Monoisotopic): 192.0270AlogP: -1.39#Rotatable Bonds: 5
Polar Surface Area: 132.13Molecular Species: ACIDHBA: 4HBD: 4
#RO5 Violations: HBA (Lipinski): 7HBD (Lipinski): 4#RO5 Violations (Lipinski):
CX Acidic pKa: 3.07CX Basic pKa: CX LogP: -1.45CX LogD: -9.58
Aromatic Rings: Heavy Atoms: 13QED Weighted: 0.42Np Likeness Score: 1.22

References

1. Beck J, Sauvage E, Charlier P, Marchand-Brynaert J..  (2008)  2-Aminopropane-1,2,3-tricarboxylic acid: Synthesis and co-crystallization with the class A beta-lactamase BS3 of Bacillus licheniformis.,  18  (13): [PMID:18515103] [10.1016/j.bmcl.2008.05.045]
2. Beck J, Vercheval L, Bebrone C, Herteg-Fernea A, Lassaux P, Marchand-Brynaert J..  (2009)  Discovery of novel lipophilic inhibitors of OXA-10 enzyme (class D beta-lactamase) by screening amino analogs and homologs of citrate and isocitrate.,  19  (13): [PMID:19467869] [10.1016/j.bmcl.2009.04.149]
3. Leung IK, Demetriades M, Hardy AP, Lejeune C, Smart TJ, Szöllössi A, Kawamura A, Schofield CJ, Claridge TD..  (2013)  Reporter ligand NMR screening method for 2-oxoglutarate oxygenase inhibitors.,  56  (2): [PMID:23234607] [10.1021/jm301583m]

Source