3-{4-[1-(1-tert-butyl-3-carboxy-4-oxo-6-fluoro-7-quinolyl)-4-piperazinyl]butyl}-6-(3-ethyl-4-methylanilino)uracil hydrochloride

ID: ALA555266

PubChem CID: 11650508

Max Phase: Preclinical

Molecular Formula: C35H44ClFN6O5

Molecular Weight: 646.76

Molecule Type: Small molecule

Associated Items:

This compound is not in our inventory system

Names and Identifiers

Canonical SMILES:  CCc1cc(Nc2cc(=O)n(CCCCN3CCN(c4cc5c(cc4F)c(=O)c(C(=O)O)cn5C(C)(C)C)CC3)c(=O)[nH]2)ccc1C.Cl

Standard InChI:  InChI=1S/C35H43FN6O5.ClH/c1-6-23-17-24(10-9-22(23)2)37-30-20-31(43)41(34(47)38-30)12-8-7-11-39-13-15-40(16-14-39)29-19-28-25(18-27(29)36)32(44)26(33(45)46)21-42(28)35(3,4)5;/h9-10,17-21,37H,6-8,11-16H2,1-5H3,(H,38,47)(H,45,46);1H

Standard InChI Key:  PMOBQURWESJJCC-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 48 51  0  0  0  0  0  0  0  0999 V2000
    7.6929    4.5529    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
  -12.9397    9.8245    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6357   10.5658    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3417    9.8071    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3516    8.3071    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6558    7.5658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.9498    8.3245    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2360   10.5809    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  -15.5397    9.8374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.8363   10.5915    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -18.1378    9.8458    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -18.1427    8.3458    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.8461    7.5915    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.5446    8.3373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2985   10.4001    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6638    6.3659    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0585    7.5453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0707    6.0446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7775    5.2828    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7897    3.7820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4965    3.0203    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5065    1.5203    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2125    0.7617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9086    1.5029    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8985    3.0029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1925    3.7616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6111    0.7486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2964    1.4973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2964   -1.4973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6111   -0.7486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.7486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.7486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2964    1.4973    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5929    0.7486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5929   -0.7486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2964   -1.4973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2964   -2.6973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8942   -1.4964    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8963   -2.6964    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9326   -0.8949    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6486   -1.3517    0.0000 F   0  0  0  0  0  0  0  0  0  0  0  0
    1.2964    2.9981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -19.1838    7.7491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -19.4336   10.6030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -19.4280   11.8030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2576    3.5988    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3358    3.5978    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2970    4.1981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  2  7  2  0
  6  7  1  0
  2  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
  9 14  2  0
 13 14  1  0
  4 15  2  0
  6 16  2  0
  5 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 21 26  1  0
 25 26  1  0
 24 27  1  0
 27 28  1  0
 27 30  2  0
 29 30  1  0
 29 31  2  0
 28 32  2  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  2  0
 31 36  1  0
 35 36  1  0
 36 37  2  0
 35 38  1  0
 38 39  1  0
 38 40  2  0
 30 41  1  0
 33 42  1  0
 12 43  1  0
 11 44  1  0
 44 45  1  0
 42 46  1  0
 42 47  1  0
 42 48  1  0
M  END

Associated Targets(non-human)

polC DNA polymerase III (243 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Bacillus subtilis (32866 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Staphylococcus aureus (210822 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Enterococcus faecalis (29875 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Enterococcus faecium (13803 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Escherichia coli (133304 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 646.76Molecular Weight (Monoisotopic): 646.3279AlogP: 4.66#Rotatable Bonds: 10
Polar Surface Area: 132.67Molecular Species: ACIDHBA: 9HBD: 3
#RO5 Violations: 1HBA (Lipinski): 11HBD (Lipinski): 3#RO5 Violations (Lipinski): 2
CX Acidic pKa: 5.71CX Basic pKa: 7.11CX LogP: 3.79CX LogD: 3.52
Aromatic Rings: 4Heavy Atoms: 47QED Weighted: 0.21Np Likeness Score: -1.09

References

1. Zhi C, Long ZY, Manikowski A, Comstock J, Xu WC, Brown NC, Tarantino PM, Holm KA, Dix EJ, Wright GE, Barnes MH, Butler MM, Foster KA, LaMarr WA, Bachand B, Bethell R, Cadilhac C, Charron S, Lamothe S, Motorina I, Storer R..  (2006)  Hybrid antibacterials. DNA polymerase-topoisomerase inhibitors.,  49  (4): [PMID:16480282] [10.1021/jm0510023]

Source