S-(3,5-Dideoxy-3-fluoro-D-xylofuranos-5-yl)-L-homocysteine

ID: ALA593447

Max Phase: Preclinical

Molecular Formula: C9H16FNO5S

Molecular Weight: 269.29

Molecule Type: Small molecule

Associated Items:

Representations

Canonical SMILES:  N[C@@H](CCSC[C@H]1OC(O)[C@H](O)[C@H]1F)C(=O)O

Standard InChI:  InChI=1S/C9H16FNO5S/c10-6-5(16-9(15)7(6)12)3-17-2-1-4(11)8(13)14/h4-7,9,12,15H,1-3,11H2,(H,13,14)/t4-,5+,6-,7+,9?/m0/s1

Standard InChI Key:  PXNSHTCESFYLEA-VYERIXCVSA-N

Associated Targets(non-human)

luxS S-ribosylhomocysteine lyase (52 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
luxS S-ribosylhomocysteine lyase (12 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Properties

Molecular Weight: 269.29Molecular Weight (Monoisotopic): 269.0733AlogP: -1.06#Rotatable Bonds: 6
Polar Surface Area: 113.01Molecular Species: ZWITTERIONHBA: 6HBD: 4
#RO5 Violations: 0HBA (Lipinski): 6HBD (Lipinski): 5#RO5 Violations (Lipinski): 0
CX Acidic pKa: 2.02CX Basic pKa: 9.49CX LogP: -3.34CX LogD: -3.35
Aromatic Rings: 0Heavy Atoms: 17QED Weighted: 0.45Np Likeness Score: 1.14

References

1. Wnuk SF, Robert J, Sobczak AJ, Meyers BP, Malladi VL, Zhu J, Gopishetty B, Pei D..  (2009)  Inhibition of S-ribosylhomocysteinase (LuxS) by substrate analogues modified at the ribosyl C-3 position.,  17  (18): [PMID:19682914] [10.1016/j.bmc.2009.07.057]

Source