3-(3,4-dimethoxyphenyl)-N-(3-(dipropylamino)propyl)-1-methyl-1H-thieno[2,3-c]pyrazole-5-carboxamide

ID: ALA602127

PubChem CID: 16020383

Max Phase: Preclinical

Molecular Formula: C24H34N4O3S

Molecular Weight: 458.63

Molecule Type: Small molecule

Names and Identifiers

Synonyms: MMV000561 | SJ000071854 | MMV000561|MLS001199470|CHEMBL602127|HMS1825A15|HMS2885A15|NSC766564|AKOS001839507|NSC-766564|NCGC00108865-01|SMR000560328|SJ000071854|C453-0352|3-(3,4-dimethoxyphenyl)-N-[3-(dipropylamino)propyl]-1-methyl-1H-thieno[2,3-c]pyrazole-5-carboxamide

Canonical SMILES:  CCCN(CCC)CCCNC(=O)c1cc2c(-c3ccc(OC)c(OC)c3)nn(C)c2s1

Standard InChI:  InChI=1S/C24H34N4O3S/c1-6-12-28(13-7-2)14-8-11-25-23(29)21-16-18-22(26-27(3)24(18)32-21)17-9-10-19(30-4)20(15-17)31-5/h9-10,15-16H,6-8,11-14H2,1-5H3,(H,25,29)

Standard InChI Key:  LEJZVWKPAYYUCZ-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 32 34  0  0  0  0  0  0  0  0999 V2000
   13.4808   -1.2745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3340   -1.6280    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2333   -0.6077    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7991   -1.0498    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.4624   -2.5124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0277   -2.9529    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7584   -4.1223    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6985   -0.0295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2642   -0.4717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1636    0.5486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7294    0.1065    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.6287    1.1268    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8956    2.2968    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1968    0.6852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9876    1.5922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2419    0.7054    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7333    0.7457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1968   -0.7054    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9876   -1.5720    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9876   -2.7720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2217   -0.7054    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7333   -0.7256    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6020    1.9695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0962    1.9573    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8560    3.2506    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1158    4.5553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8786    5.8478    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0786    5.8370    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6158    4.5666    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8725    5.8704    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6726    5.8777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8561    3.2732    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  4  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 16  2  0
 21 22  1  0
 22 14  1  0
 17 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  2  0
 26 27  1  0
 27 28  1  0
 26 29  1  0
 29 30  1  0
 30 31  1  0
 29 32  2  0
 32 23  1  0
M  END

Alternative Forms

1. Parent:

   

   ALA602127

   3-(3,4-dimethoxyphenyl)-N-[3-(dipropylamino)propyl]-1-methyl-1H-thieno[2,3-c]pyrazole-5-carboxamide

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Small molecule

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 458.63

Molecular Weight (Monoisotopic): 458.2352

AlogP: 4.56

#Rotatable Bonds: 12

Polar Surface Area: 68.62

Molecular Species: BASE

HBA: 7

HBD: 1

#RO5 Violations: ┄

HBA (Lipinski): 7

HBD (Lipinski): 1

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: 13.97

CX Basic pKa: 10.33

CX LogP: 4.32

CX LogD: 1.49

Aromatic Rings: 3

Heavy Atoms: 32

QED Weighted: 0.40

Np Likeness Score: -1.59

References

1. Guiguemde WA, Shelat AA, Bouck D, Duffy S, Crowther GJ, Davis PH, Smithson DC, Connelly M, Clark J, Zhu F, Jiménez-Díaz MB, Martinez MS, Wilson EB, Tripathi AK, Gut J, Sharlow ER, Bathurst I, El Mazouni F, Fowble JW, Forquer I, McGinley PL, Castro S, Angulo-Barturen I, Ferrer S, Rosenthal PJ, Derisi JL, Sullivan DJ, Lazo JS, Roos DS, Riscoe MK, Phillips MA, Rathod PK, Van Voorhis WC, Avery VM, Guy RK..  (2010)  Chemical genetics of Plasmodium falciparum.,  465  (7296): [PMID:20485428] [10.1038/nature09099]

2. PubChem BioAssay data set, 

3. PubChem BioAssay data set, 

4. Simon Macdonald, Paul Willis, Paul Kowalczyk, Thomas Spangenberg, Jeremy Burrows and Tim Wells. Medicines for Malaria Venture (MMV), PO Box 1826, 20, rte de Pré-Bois, 1215 Geneva 15, Switzerland and SCYNEXIS Inc. P.O. Box 12878 Research Triangle Park, North Carolina 27709-2878 USA. Malaria Box,  [10.6019/CHEMBL2028040]

5. Ben Gold, Thulasi Warrier, Selin Somersan, Landys Lopez-Quezada, Julia Roberts, David Little and Carl Nathan.. Malaria Box Tuberculosis Screening Data,  [10.6019/CHEMBL2094260]

6. Conor Caffrey and Brian Suzuki; Center for Discovery and Innovation in Parasitic Diseases, Dept. of Pathology, University of California San Francisco (www.cdipd.org).. Malaria Box Schistosomiasis Screening Data,  [10.6019/CHEMBL2363022]

7. UCSF DeRisi Lab. UCSF DeRisi Lab MMV Box Apicoplast Screening,  [10.6019/CHEMBL2448809]

8. University of Vermont. MMV Box Cryptosporidium parvum screening set,  [10.6019/CHEMBL3137356]

9. Northwick Park. MMV Box Onchocerca lienalis screening set,  [10.6019/CHEMBL3137381]

10. Boyom, F.F., Fokou, P.V.T., Tchokouaha, L.R.Y., Spangenberg, T., Mfopa, A.N., Kouipou, R.M.T., Mbouna, C.J., Donkeng Donfack, V.F., Zollo, P.H.A. University of Yaoundé, IMPM Yaoundé and MMV.. MMV Malaria Box screening against Toxoplasma gondii and Entamoeba histolytica.,  [10.6019/CHEMBL3301448]

11. Imperial-Medicines for Malaria Venture Centre of Excellence, Imperial College, London.. MMV Malaria Box gametocyte functional viability assay screening.,  [10.6019/CHEMBL3301451]

12. Medicines for Malaria Venture.. MMV Malaria Box hERG screening.,  [10.6019/CHEMBL3301458]

13. Hui Lab, SGC, University of Toronto, Canada.. MMV Malaria Box thermal shift screening.,  [10.6019/CHEMBL3301461]

14. Igarashi Lab, National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Japan. MMV Malaria Box anti-babesial screening.,  [10.6019/CHEMBL3301464]

15. Kaiser Lab, University Hospital Essen, Germany.. MMV Malaria Box screening against Plasmodium falciparum Deoxyhypusine hydroxylase,  [10.6019/CHEMBL3301470]

16. Ketas, T., Moore, J.P., Weill Cornell Medical College, USA.. MMV Malaria Box HIV and cytotoxicity screening.,  [10.6019/CHEMBL3301472]

17. National Cancer Institute, NIH.. MMV Malaria Box screening against the the NCI60 panel of human tumor cell lines.,  [10.6019/CHEMBL3301486]

18. St Onge, R.P. Yeast Chemical Genomics Laboratory, Stanford Genome Technology Center, Stanford University.. MMV Malaria Box yeast growth screening.,  [10.6019/CHEMBL3301546]

19. Poulsen, S-A., Andrews, K.T., Tonissen, K.F., Nawaratna, S., Eskitis Institute for Drug Discovery, Griffith University, Australia.. MMV Mararia Box screening against P. falciparum asexual stage parasites under hypoxia and bicarbonate modified culture conditions.,  [10.6019/CHEMBL3301550]

20. Taramelli Lab, University of Milan, Italy.. MMV Malaria Box screening in pLDH viability assay against Plasmodium falciparum gametocytes.,  [10.6019/CHEMBL3301555]

21. Van Voorhis Lab, University of Washington, USA.. MMV Box screening against Plasmodium falciparum protein kinases and aminoacyl tRNA synthetases.,  [10.6019/CHEMBL3301562]

22. Horrocks lab, Keele University, UK.. MMV box screening in the Dd2 P. falciparum strain,  [10.6019/CHEMBL3392922]

23. LT Jensen lab, Mahidol University, Thailand (submitted by: Laran T. Jensen, Worathad Chindaudomsate, Amornrat Naranuntarat Jensen). MMV box selection for compounds with potential use in combination with artemisinin using S. cerevisiae,  [10.6019/CHEMBL3392924]

24. TropIQ Health Sciences. MMV Malaria Box gametocyte standard membrane feeding assay screening.,  [10.6019/CHEMBL3430850]

25. St. Jude Leishmania screening dataset.,  [10.6019/CHEMBL3433997]

Source

Source(4):

• St Jude Malaria Screening
• PubChem BioAssays
• MMV Malaria Box
• St Jude Leishmania Screening