(S)-3-({(S)-(S)-5-[(S)-2-((S)-Acetyl-methyl-amino)-3-methyl-pentanoylamino]-4-oxo-1,2,4,5,6,7-hexahydro-azepino[3,2,1-hi]indole-2-carbonyl}-amino)-5-(4-fluoro-benzylsulfanyl)-4-oxo-pentanoic acid

ID: ALA68970

PubChem CID: 44309956

Max Phase: Preclinical

Molecular Formula: C34H41FN4O7S

Molecular Weight: 668.79

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  CC[C@H](C)[C@@H](C(=O)N[C@H]1CCc2cccc3c2N(C1=O)[C@H](C(=O)N[C@@H](CC(=O)O)C(=O)CSCc1ccc(F)cc1)C3)N(C)C(C)=O

Standard InChI:  InChI=1S/C34H41FN4O7S/c1-5-19(2)30(38(4)20(3)40)33(45)36-25-14-11-22-7-6-8-23-15-27(39(31(22)23)34(25)46)32(44)37-26(16-29(42)43)28(41)18-47-17-21-9-12-24(35)13-10-21/h6-10,12-13,19,25-27,30H,5,11,14-18H2,1-4H3,(H,36,45)(H,37,44)(H,42,43)/t19-,25-,26-,27-,30-/m0/s1

Standard InChI Key:  JQBZFNPXCPETAI-VZLANYELSA-N

Molfile:  

     RDKit          2D

 47 50  0  0  1  0  0  0  0  0999 V2000
    4.6375   -3.3417    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3292   -3.7750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8917   -3.6792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7417   -3.4667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3625   -4.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8375   -2.5542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6542   -2.4542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4917   -3.7917    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.0000   -3.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0875   -4.9917    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1542   -3.3042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3292   -3.6250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0792   -3.9542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7792   -4.5542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7500   -3.7375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3333   -4.1167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5042   -4.9417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4542   -3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8792   -4.5167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6542   -2.6417    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3375   -1.8917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6542   -5.0375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9917   -2.5042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2458   -4.9292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5375   -5.7667    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.1792   -3.6875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5250   -1.8750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9375   -4.8875    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.1750   -4.7750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8167   -5.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4250   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9750   -1.6917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2042   -4.5042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3625   -4.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5500   -5.9917    0.0000 F   0  0  0  0  0  0  0  0  0  0  0  0
   11.7875   -4.7792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1167   -6.0417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0542   -4.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3917   -5.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2375   -2.8042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0833   -3.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4792   -1.0417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6292   -4.4417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6542   -1.1500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5125   -5.2625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9167   -5.1000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6042   -6.0792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0
  3  1  1  0
  4  8  1  0
  2  5  1  1
  6  1  1  0
  7  6  1  0
 11  8  1  1
  9  2  1  0
 10  5  1  0
 11  3  1  0
 13 12  1  6
 13  4  1  0
 14 10  1  0
 14 15  1  1
 16 12  1  0
 17 14  1  0
 18 15  1  0
 19  3  2  0
 20  4  2  0
 21  6  2  0
 22  5  2  0
 23 11  1  0
 24 16  2  0
 25 17  2  0
 26 18  2  0
 27 21  1  0
 28 33  1  0
 29 13  1  0
 30 37  2  0
 31 18  1  0
 32  7  2  0
 33 17  1  0
 34 43  1  0
 35 30  1  0
 36 38  2  0
 37 39  1  0
 38 34  1  0
 39 34  2  0
 40 12  1  0
 41 16  1  0
 42 44  2  0
 43 28  1  0
 44 21  1  0
 45 29  1  0
 29 46  1  1
 47 45  1  0
  7  9  1  0
 27 23  1  0
 32 42  1  0
 36 30  1  0
M  END

Associated Targets(Human)

GZMB Tchem Granzyme B (52 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CASP3 Tchem Caspase-3 (3632 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 668.79Molecular Weight (Monoisotopic): 668.2680AlogP: 2.87#Rotatable Bonds: 14
Polar Surface Area: 153.19Molecular Species: ACIDHBA: 7HBD: 3
#RO5 Violations: 1HBA (Lipinski): 11HBD (Lipinski): 3#RO5 Violations (Lipinski): 2
CX Acidic pKa: 3.76CX Basic pKa: CX LogP: 2.94CX LogD: -0.33
Aromatic Rings: 2Heavy Atoms: 47QED Weighted: 0.28Np Likeness Score: -0.28

References

1. Willoughby CA, Bull HG, Garcia-Calvo M, Jiang J, Chapman KT, Thornberry NA..  (2002)  Discovery of potent, selective human granzyme B inhibitors that inhibit CTL mediated apoptosis.,  12  (16): [PMID:12127536] [10.1016/s0960-894x(02)00363-3]

Source